STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (502 aa)    
Predicted Functional Partners:
ADQ13651.1
PFAM: inner-membrane translocator; KEGG: ctc:CTC00906 ribose transport system permease protein RbsC.
 0.999
ADQ13652.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpd:Teth39_2038 monosaccharide-transporting ATPase.
 0.989
ADQ13656.1
PFAM: inner-membrane translocator; KEGG: pin:Ping_2789 ABC ribose transporter permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.989
ADQ13657.1
PFAM: inner-membrane translocator; KEGG: pin:Ping_2788 ABC-type transporter for ribose/xylose/arabinose/galactoside systems, permease protein.
 0.983
ADQ14113.1
PFAM: inner-membrane translocator; KEGG: jan:Jann_2404 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.980
ADQ13658.1
KEGG: pin:Ping_2790 bifunctional carbohydrate binding and transport protein.
 0.975
ADQ14111.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: jan:Jann_2406 periplasmic binding protein/LacI transcriptional regulator.
 
 0.966
ADQ14112.1
ABC transporter related protein; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 
0.908
ADQ13659.1
KEGG: pin:Ping_2787 ABC transporter for sugar (aldose) ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 
0.905
ADQ14721.1
PFAM: inner-membrane translocator; KEGG: nth:Nther_0422 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
     0.707
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.