Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13657.1PFAM: inner-membrane translocator; KEGG: pin:Ping_2788 ABC-type transporter for ribose/xylose/arabinose/galactoside systems, permease protein. (312 aa)    
Predicted Functional Partners:
ADQ13652.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpd:Teth39_2038 monosaccharide-transporting ATPase.
 0.997
ADQ13658.1
KEGG: pin:Ping_2790 bifunctional carbohydrate binding and transport protein.
 0.997
ADQ13659.1
KEGG: pin:Ping_2787 ABC transporter for sugar (aldose) ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.988
ADQ14112.1
ABC transporter related protein; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.984
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.983
ADQ14111.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: jan:Jann_2406 periplasmic binding protein/LacI transcriptional regulator.
 
 0.977
ADQ13656.1
PFAM: inner-membrane translocator; KEGG: pin:Ping_2789 ABC ribose transporter permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.816
ADQ13655.1
KEGG: bpu:BPUM_1173 branched-chain alpha-keto acid dehydrogenase subunit E2; manually curated; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein.
  
    0.556
ADQ13654.1
PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bha:BH0777 acetoin dehydrogenase (TPP-dependent) beta chain.
       0.497
ADQ13653.1
KEGG: tpd:Teth39_0790 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component.
  
    0.442
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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