Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ13680.1PFAM: Late competence development protein ComFB; KEGG: hor:Hore_19130 hypothetical protein. (101 aa)    
Predicted Functional Partners:
ADQ13931.1
PFAM: phosphoribosyltransferase; KEGG: hor:Hore_16480 amidophosphoribosyltransferase.
  
  
 0.900
ADQ14197.1
KEGG: tex:Teth514_0250 hypothetical protein.
  
     0.740
ADQ14196.1
PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: tex:Teth514_0249 hypothetical protein.
  
     0.690
ADQ15291.1
KEGG: hor:Hore_01730 putative transcriptional regulator, CopG family.
  
     0.633
ADQ14894.1
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.615
ADQ14826.1
PFAM: protein of unknown function DUF322; KEGG: hor:Hore_06280 hypothetical protein.
  
     0.604
ADQ14540.1
KEGG: csc:Csac_2197 hypothetical protein.
  
     0.595
ADQ13681.1
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: nth:Nther_2443 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region.
       0.513
ADQ14198.1
CoA-substrate-specific enzyme activase; KEGG: tte:TTE0319 2-hydroxyglutaryl-CoA dehydratase activator; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
  
     0.494
ADQ14319.1
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: hor:Hore_15500 hypothetical protein.
  
     0.469
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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