STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13686.1TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drt:Dret_1528 diguanylate cyclase; SMART: GGDEF domain containing protein. (316 aa)    
Predicted Functional Partners:
ADQ14595.1
KEGG: kko:Kkor_0171 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein.
  
 0.966
ADQ14294.1
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; KEGG: sat:SYN_00099 two-component response regulator; SMART: metal-dependent phosphohydrolase HD region.
 
   0.902
ADQ14200.1
KEGG: nth:Nther_2059 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
   0.885
ADQ14324.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein.
  
 0.884
ADQ15431.1
KEGG: hor:Hore_21640 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
 
    0.864
ADQ14576.1
KEGG: pmo:Pmob_1796 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
 
      0.824
ADQ13976.1
TIGRFAM: PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; KEGG: dth:DICTH_1580 putative response regulator; SMART: metal-dependent phosphohydrolase HD region; PAS domain containing protein.
 
 0.819
ADQ13685.1
PFAM: cobalamin B12-binding domain protein; KEGG: drt:Dret_1529 cobalamin B12-binding domain protein.
       0.801
ADQ13739.1
Putative PAS/PAC sensor protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; PAS fold-4 domain protein; KEGG: dth:DICTH_1580 putative response regulator; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein.
 
 0.790
ADQ15650.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; KEGG: mta:Moth_0689 putative PAS/PAC sensor protein; SMART: GGDEF domain containing protein.
 
   0.786
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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