STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13703.1KEGG: bfo:BRAFLDRAFT_92229 hypothetical protein. (127 aa)    
Predicted Functional Partners:
ADQ13704.1
KEGG: cbt:CLH_1932 hypothetical protein.
       0.509
ADQ13702.1
PFAM: histidine triad (HIT) protein; KEGG: cbi:CLJ_B2118 HIT family protein.
       0.473
ADQ13701.1
KEGG: cno:NT01CX_0321 helicase, putative; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
       0.456
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.