STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13735.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slt:Slit_2775 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
ADQ13581.1
PFAM: sulfatase; KEGG: eum:ECUMN_4210 putative sulfatase/phosphatase.
   
 
 0.602
ADQ13789.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hje:HacjB3_00015 short-chain dehydrogenase/reductase SDR.
  
     0.594
ADQ14538.1
KEGG: hor:Hore_10280 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
 
 
 0.583
ADQ14539.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.582
ADQ13991.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoi:ECO111_3498 putative deoxygluconate dehydrogenase.
  
     0.505
ADQ15701.1
PFAM: Glucitol operon activator; KEGG: bha:BH0770 hypothetical protein.
  
    0.481
ADQ14510.1
Beta-glucuronidase; KEGG: bhy:BHWA1_02243 beta-D-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.461
ADQ15700.1
PTS system, glucitol/sorbitol-specific, IIC subunit; KEGG: bha:BH0771 PTS system, glucitol/sorbitol-specific enzyme II, C2 component (permease); TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor.
  
    0.457
ADQ13734.1
KEGG: dal:Dalk_4228 conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Two component regulator three Y domain-containing protein.
       0.456
ADQ13683.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; KEGG: glo:Glov_1550 multi-sensor hybrid histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
   
 
 0.450
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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