Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13794.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: lsg:lse_0451 amidase, hydantoinase/carbamoylase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein. (413 aa)    
Predicted Functional Partners:
ADQ15586.1
PFAM: amidohydrolase; KEGG: pmo:Pmob_1730 dihydropyrimidinase.
 
 
 0.958
ADQ15207.1
KEGG: ctc:CTC00071 diaminopropionate ammonia-lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
 
  
 0.891
ADQ13795.1
TIGRFAM: amidohydrolase; KEGG: cdf:CD1086 putative peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.778
ADQ13796.1
TIGRFAM: amidohydrolase; KEGG: cdf:CD1086 putative peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.738
ADQ13793.1
KEGG: amt:Amet_2942 membrane protein.
 
     0.734
ADQ13792.1
Transcriptional regulator, CdaR; KEGG: bpf:BpOF4_09750 putative transcriptional regulator; PFAM: GAF domain protein; SMART: GAF domain protein.
 
     0.520
ADQ13775.1
Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; helix-turn-helix Fis-type; KEGG: dsy:DSY4159 hypothetical protein.
 
     0.439
ADQ13797.1
PFAM: methylpurine-DNA glycosylase (MPG); KEGG: nth:Nther_0710 DNA-3-methyladenine glycosylase.
       0.424
ADQ15520.1
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: pmo:Pmob_1738 molybdopterin dehydrogenase FAD-binding.
 
  
 0.401
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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