Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13806.1PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: syn:slr0338 hypothetical protein. (321 aa)    
Predicted Functional Partners:
ADQ13807.1
Glutamine--scyllo-inositol transaminase; KEGG: mru:mru_1959 aminotransferase DegT/DnrJ/EryC1/StrS family; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.988
ADQ13897.1
PFAM: protein of unknown function DUF1009; KEGG: hor:Hore_17540 hypothetical protein.
      0.881
ADQ13898.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.693
htpX
PFAM: peptidase M48 Ste24p; KEGG: dsy:DSY2106 hypothetical protein; Belongs to the peptidase M48B family.
       0.503
lysS
KEGG: hor:Hore_00750 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.487
ADQ14041.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: hor:Hore_16970 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.404
ADQ13559.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: hor:Hore_16970 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.401
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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