Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13817.1PFAM: protein of unknown function DUF970; KEGG: hor:Hore_20370 hypothetical protein. (119 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.818
ADQ13818.1
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: hor:Hore_20360 DNA polymerase III, delta prime subunit.
  
    0.809
ADQ13819.1
PFAM: PSP1 domain protein; KEGG: hor:Hore_20350 PSP1 domain protein.
  
    0.757
ADQ13821.1
PFAM: methyltransferase small; KEGG: tmt:Tmath_0149 methyltransferase small; Belongs to the methyltransferase superfamily.
       0.705
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.705
ADQ13820.1
PFAM: protein of unknown function DUF972; KEGG: hor:Hore_20340 hypothetical protein.
  
    0.700
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.604
rex
CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.485
ADQ13815.1
KEGG: hor:Hore_20410 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.473
ADQ13825.1
KEGG: hor:Hore_20260 beta-lactamase domain protein.
       0.467
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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