STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13885.1PFAM: sodium/hydrogen exchanger; KEGG: nth:Nther_0276 sodium/hydrogen exchanger. (429 aa)    
Predicted Functional Partners:
ADQ14099.1
PFAM: sodium/hydrogen exchanger; KEGG: amt:Amet_4404 sodium/hydrogen exchanger.
 
 
 
 0.753
ADQ13884.1
Manually curated; PFAM: CBS domain containing protein; KEGG: tle:Tlet_1060 signal transduction protein; SMART: CBS domain containing protein.
       0.554
ADQ13886.1
KEGG: hor:Hore_17730 rod shape-determining protein Mbl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl.
  
    0.554
ADQ13883.1
PFAM: PfkB domain protein; KEGG: tnp:Tnap_0099 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
       0.536
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
   
 0.511
ADQ13887.1
KEGG: hor:Hore_17720 hypothetical protein.
       0.479
ADQ14688.1
Multi-sensor signal transduction histidine kinase; KEGG: dde:Dde_0310 CBS; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; CBS domain containing protein.
     
 0.468
ADQ13758.1
PFAM: TrkA-C domain protein; KEGG: dau:Daud_0860 TrkA domain-containing protein.
  
  
 0.453
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.429
ADQ13888.1
PFAM: protein of unknown function DUF490; KEGG: hor:Hore_17710 hypothetical protein.
       0.408
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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