STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13903.1KEGG: hor:Hore_17480 hypothetical protein. (426 aa)    
Predicted Functional Partners:
ADQ13904.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
 
     0.953
ADQ13902.1
PFAM: permease YjgP/YjgQ family protein; KEGG: hor:Hore_17490 permease YjgP/YjgQ family protein.
 
     0.948
ADQ13901.1
KEGG: hor:Hore_17500 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.896
ADQ13905.1
PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein.
 
     0.858
ADQ13898.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.855
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.835
ADQ13897.1
PFAM: protein of unknown function DUF1009; KEGG: hor:Hore_17540 hypothetical protein.
 
     0.795
ADQ13936.1
PFAM: permease YjgP/YjgQ family protein; KEGG: hor:Hore_17610 permease YjgP/YjgQ family protein.
 
     0.793
ADQ13917.1
PFAM: S-layer domain-containing protein; KEGG: hor:Hore_17460 S-layer domain protein.
 
     0.776
ADQ13888.1
PFAM: protein of unknown function DUF490; KEGG: hor:Hore_17710 hypothetical protein.
 
     0.775
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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