STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13925.1KEGG: hor:Hore_17240 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (545 aa)    
Predicted Functional Partners:
ADQ15255.1
KEGG: hor:Hore_02280 hypothetical protein; PFAM: protein of unknown function DUF123; SMART: Excinuclease ABC C subunit domain protein.
  
     0.631
ADQ15062.1
KEGG: hor:Hore_12160 peptidyl-prolyl cis-trans isomerase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat.
  
     0.583
ADQ14230.1
PFAM: SufBD protein; KEGG: abi:Aboo_0898 SufBD protein.
  
     0.544
ADQ13926.1
PFAM: Sporulation domain-containing protein; KEGG: hor:Hore_16520 SpoIID/LytB domain protein.
 
     0.542
ADQ13936.1
PFAM: permease YjgP/YjgQ family protein; KEGG: hor:Hore_17610 permease YjgP/YjgQ family protein.
 
     0.539
ADQ15361.1
Putative signal transduction protein with CBS domains; KEGG: hor:Hore_00940 CBS domain containing protein; PFAM: CBS domain containing protein; HutP family protein; SMART: CBS domain containing protein.
  
     0.506
ADQ15387.1
PFAM: protein of unknown function DUF501; KEGG: hor:Hore_00530 hypothetical protein.
 
     0.501
ADQ15094.1
Protein of unknown function DUF21; KEGG: hor:Hore_12560 putative membrane CBS domain protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein.
  
     0.487
ADQ14693.1
PFAM: S-layer domain-containing protein; KEGG: hor:Hore_11770 S-layer domain protein.
  
     0.464
ADQ14203.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: hor:Hore_08490 cupin 2 conserved barrel domain protein.
  
     0.458
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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