Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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ADQ13950.1TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: hor:Hore_16350 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family. (404 aa)    
Predicted Functional Partners:
ADQ13951.1
TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: hor:Hore_16340 L-serine ammonia-lyase, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein.
  
    0.732
ADQ13952.1
TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: hor:Hore_16330 L-serine ammonia-lyase, alpha subunit; PFAM: serine dehydratase alpha chain.
  
    0.708
ADQ13949.1
PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: hor:Hore_16380 hypothetical protein.
       0.683
ADQ14944.1
Peptidase M23; KEGG: hor:Hore_11020 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
 
 0.674
ADQ14493.1
KEGG: nth:Nther_0252 response regulator receiver protein; PFAM: response regulator receiver; Tetratricopeptide TPR_1 repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat.
  
 
 0.595
ADQ15738.1
KEGG: hor:Hore_20820 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein.
   
 
 0.565
ADQ14763.1
TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: hor:Hore_07740 putative membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein.
 
  
 0.557
ADQ15780.1
KEGG: hor:Hore_23400 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein.
  
 
 0.553
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
 
  
 0.550
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.530
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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