STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13970.1KEGG: dhd:Dhaf_0495 response regulator receiver and SARP domain protein. (353 aa)    
Predicted Functional Partners:
ADQ13998.1
Signal transduction histidine kinase, LytS; KEGG: bbe:BBR47_58750 two-component hybrid sensor and regulator; PFAM: histidine kinase internal region; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein.
 
   
 0.680
ADQ13969.1
Hypothetical protein; KEGG: cho:Chro.40489 adapter-related protein complex 1 beta 1 subunit (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large chain).
       0.452
ADQ13910.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aoe:Clos_2737 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.451
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.448
ADQ13972.1
KEGG: sfu:Sfum_3218 glutaredoxin; TIGRFAM: glutaredoxin 3; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin.
       0.421
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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