STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13979.1Hypothetical protein; KEGG: mev:Metev_2351 periplasmic copper-binding protein. (978 aa)    
Predicted Functional Partners:
ADQ14944.1
Peptidase M23; KEGG: hor:Hore_11020 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
  
 0.590
ADQ14275.1
KEGG: tde:TDE2703 hypothetical protein.
    
   0.558
ADQ14546.1
PFAM: Sporulation domain-containing protein; KEGG: hor:Hore_14360 sporulation domain protein.
  
 
 0.436
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.