STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14053.1PFAM: transposase IS3/IS911 family protein; KEGG: swo:Swol_2510 transposase IS3/IS911. (103 aa)    
Predicted Functional Partners:
ADQ14912.1
Integrase catalytic region; KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region.
  
    0.721
ADQ13718.1
Integrase catalytic region; KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region.
  
    0.717
ADQ14038.1
Integrase catalytic region; KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region.
  
    0.717
ADQ14062.1
Integrase catalytic region; KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region.
  
    0.717
ADQ14480.1
Integrase catalytic region; KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region.
  
    0.717
ADQ15729.1
Integrase catalytic region; KEGG: gtn:GTNG_3490 IS1477 transposase; manually curated; PFAM: Integrase catalytic region.
  
    0.717
ADQ14052.1
KEGG: ate:Athe_1661 hypothetical protein.
       0.596
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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