STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14130.1PFAM: Carbohydrate kinase, FGGY-like; KEGG: trq:TRQ2_0653 carbohydrate kinase FGGY. (512 aa)    
Predicted Functional Partners:
ADQ14997.1
TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: hor:Hore_09980 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.949
ADQ13726.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: sme:SMc02334 putative pentose kinase transmembrane protein.
  
  
 
0.925
ADQ14115.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: hor:Hore_19510 xylulokinase.
  
  
 
0.925
ADQ14129.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpu:KP1_1110 3-oxoacyl-(acyl-carrier protein) reductase.
  
    0.564
ADQ14131.1
TIGRFAM: ketose-bisphosphate aldolase; KEGG: cno:NT01CX_0290 tagatose bisphosphate family class II aldolase; PFAM: ketose-bisphosphate aldolase class-II.
  
  
 0.554
ADQ14132.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ate:Athe_0699 alcohol dehydrogenase zinc-binding domain protein.
  
  
 0.501
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.417
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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