STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14181.1PFAM: protein of unknown function DUF1028; KEGG: gct:GC56T3_1921 protein of unknown function DUF1028. (216 aa)    
Predicted Functional Partners:
ADQ14180.1
KEGG: ctc:CTC00445 putative metal dependent hydrolase.
       0.697
ADQ15536.1
PFAM: Acetamidase/Formamidase; KEGG: bbe:BBR47_52900 hypothetical protein.
 
     0.552
ADQ14182.1
PFAM: PfkB domain protein; KEGG: afl:Aflv_2784 fructokinase (ribokinase family); Belongs to the carbohydrate kinase PfkB family.
       0.551
ADQ14177.1
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: cpo:COPRO5265_0137 tungsten-containing aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase.
       0.504
ADQ14178.1
KEGG: pmo:Pmob_0384 MoaD family protein; TIGRFAM: MoaD family protein; PFAM: thiamineS protein.
       0.504
ADQ14179.1
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: pmo:Pmob_0383 UBA/ThiF-type NAD/FAD binding protein.
       0.504
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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