Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ14185.1PFAM: peptidase M48 Ste24p; KEGG: aae:aq_972 hypothetical protein. (434 aa)    
Predicted Functional Partners:
ADQ15595.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: paa:Paes_0565 TonB-dependent receptor.
  
     0.575
ADQ13889.1
PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: hor:Hore_17680 surface antigen (D15).
  
   
 0.547
argH
KEGG: hor:Hore_02920 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase.
 
    0.523
ADQ14784.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pwa:Pecwa_0558 TonB-dependent receptor.
  
     0.514
ADQ14782.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein.
  
    0.490
ADQ13898.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.436
ADQ14298.1
PFAM: outer membrane efflux protein; KEGG: hor:Hore_05030 outer membrane efflux protein.
  
     0.435
argG
TIGRFAM: argininosuccinate synthase; KEGG: hor:Hore_02900 argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.425
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.401
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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