Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ14195.1KEGG: tpd:Teth39_1975 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR. (258 aa)    
Predicted Functional Partners:
ADQ14196.1
PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: tex:Teth514_0249 hypothetical protein.
       0.551
ADQ14197.1
KEGG: tex:Teth514_0250 hypothetical protein.
       0.551
ADQ14198.1
CoA-substrate-specific enzyme activase; KEGG: tte:TTE0319 2-hydroxyglutaryl-CoA dehydratase activator; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
       0.551
ADQ14194.1
TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: cac:CA_C2918 mannose-6 phospate isomelase; PFAM: mannose-6-phosphate isomerase type I.
     
 0.546
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
    0.524
ADQ14193.1
PFAM: PfkB domain protein; KEGG: bmq:BMQ_2407 putative sugar kinase; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.491
ADQ15528.1
Cupin 2 conserved barrel domain protein; KEGG: mta:Moth_2004 MerR family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
  
 0.447
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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