Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ14202.1PFAM: regulatory protein TetR; KEGG: hor:Hore_08440 transcriptional regulator, TetR family. (190 aa)    
Predicted Functional Partners:
ADQ14468.1
PFAM: regulatory protein TetR; KEGG: gur:Gura_1655 TetR family transcriptional regulator.
  
     0.729
ADQ14203.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: hor:Hore_08490 cupin 2 conserved barrel domain protein.
 
  
 0.578
ADQ14325.1
PFAM: regulatory protein TetR; KEGG: mpd:MCP_2915 TetR family transcriptional regulator.
  
     0.523
ADQ14295.1
PFAM: regulatory protein TetR; KEGG: hor:Hore_05020 transcriptional regulator, TetR family.
  
     0.492
ADQ14201.1
KEGG: chy:CHY_0159 hypothetical protein.
       0.471
ADQ14200.1
KEGG: nth:Nther_2059 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
       0.435
ADQ14207.1
PFAM: acriflavin resistance protein; KEGG: adg:Adeg_1907 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.435
ADQ14205.1
PFAM: outer membrane efflux protein; KEGG: npu:Npun_F6385 outer membrane efflux protein.
 
   
 0.429
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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