Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14215.1KEGG: hor:Hore_22510 hypothetical protein. (188 aa)    
Predicted Functional Partners:
ADQ14214.1
KEGG: hor:Hore_22520 hypothetical protein.
       0.773
ADQ14216.1
KEGG: pmo:Pmob_0976 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.
       0.487
ADQ14217.1
PFAM: MscS Mechanosensitive ion channel; KEGG: sit:TM1040_2507 MscS mechanosensitive ion channel.
       0.487
ADQ14213.1
Membrane protein; Manually curated; KEGG: hor:Hore_08330 predicted membrane protein.
       0.461
ADQ14218.1
KEGG: hor:Hore_11290 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein.
       0.433
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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