Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADQ14229.1KEGG: mif:Metin_1116 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (249 aa)    
Predicted Functional Partners:
ADQ14230.1
PFAM: SufBD protein; KEGG: abi:Aboo_0898 SufBD protein.
 
 
 0.985
ADQ15480.1
FeS assembly protein SufD; KEGG: ckr:CKR_0746 hypothetical protein; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.
 
 
 0.979
ADQ15479.1
KEGG: ckr:CKR_0747 hypothetical protein; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.960
ADQ15481.1
FeS assembly protein SufB; KEGG: ckr:CKR_0745 hypothetical protein; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein.
 
 0.959
ADQ15478.1
KEGG: cbe:Cbei_1852 NifU family SUF system FeS assembly protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.819
ADQ14233.1
KEGG: drm:Dred_0439 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.747
ADQ14228.1
PFAM: L-fucose isomerase-like-like; L-fucose isomerase _2 domain protein; KEGG: tmt:Tmath_0513 L-fucose isomerase-like protein.
       0.714
ADQ14231.1
KEGG: drm:Dred_0437 hypothetical protein.
       0.671
ADQ14232.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2358 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein.
       0.671
ADQ14234.1
KEGG: cyh:Cyan8802_1005 protein of unknown function DUF470.
       0.636
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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