Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ14238.1KEGG: hor:Hore_11060 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (240 aa)    
Predicted Functional Partners:
obg
GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
 
    0.885
ADQ14239.1
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
       0.634
ADQ14240.1
KEGG: kcr:Kcr_0602 glycine dehydrogenase subunit 2.
       0.580
ADQ14241.1
PFAM: ATP-NAD/AcoX kinase; KEGG: aco:Amico_1755 ATP-NAD/AcoX kinase.
       0.520
ADQ14236.1
KEGG: fre:Franean1_2247 hypothetical protein.
       0.494
ADQ14237.1
PFAM: Linocin_M18 bacteriocin protein; KEGG: hor:Hore_15970 Linocin_M18 bacteriocin protein.
       0.494
ADQ14459.1
PFAM: protein of unknown function DUF89; KEGG: hor:Hore_21010 hypothetical protein.
 
     0.419
ADQ14230.1
PFAM: SufBD protein; KEGG: abi:Aboo_0898 SufBD protein.
 
     0.408
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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