STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnCPhosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (258 aa)    
Predicted Functional Partners:
ADQ14252.1
KEGG: rde:RD1_1055 phosphonate ABC transporter, permease component; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.996
ADQ14253.1
KEGG: cyb:CYB_1469 phosphonate ABC transporter, permease protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.996
ADQ14254.1
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: cyb:CYB_0011 putative phosphonate ABC transporter, phosphonate-binding protein.
 
 
 0.996
ADQ15670.1
KEGG: tai:Taci_0209 methyl-accepting chemotaxis sensory transducer; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3.
 
 
 0.981
ADQ13986.1
KEGG: kol:Kole_0126 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
    0.835
ADQ14233.1
KEGG: drm:Dred_0439 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.818
ADQ14250.1
KEGG: hor:Hore_19310 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related.
       0.471
ADQ14668.1
Transcriptional regulator, GntR family; Manually curated; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: hor:Hore_04070 transcriptional regulator, GntR family; SMART: regulatory protein GntR HTH.
  
  
 0.411
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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