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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14256.1KEGG: cbi:CLJ_0035 transposase, family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB. (417 aa)    
Predicted Functional Partners:
ADQ14191.1
PFAM: transposase IS200-family protein; KEGG: bdu:BDU_1120 transposase-like protein.
 
    0.735
ADQ14068.1
PFAM: transposase IS200-family protein; KEGG: ana:alr7009 transposase.
 
    0.701
ADQ14276.1
KEGG: tde:TDE2702 hypothetical protein.
  
 
   0.661
ADQ14257.1
KEGG: sat:SYN_01287 hydroxyacylglutathione hydrolase.
       0.457
ADQ15538.1
KEGG: lba:Lebu_0008 hypothetical protein.
  
     0.434
ADQ14255.1
PFAM: fumarate lyase; Fumarase C-like; KEGG: mta:Moth_1273 aspartate ammonia-lyase.
       0.404
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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