STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14336.1KEGG: slp:Slip_1624 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (337 aa)    
Predicted Functional Partners:
ADQ14747.1
KEGG: hor:Hore_07930 cell wall hydrolase SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
   
 0.513
ADQ14894.1
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.500
ADQ14880.1
PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; KEGG: hor:Hore_05880 cell wall hydrolase SleB.
 
   
 0.467
ADQ14337.1
KEGG: tit:Thit_0243 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
       0.463
ADQ14338.1
Two component transcriptional regulator, AraC family; KEGG: tex:Teth514_0224 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver.
       0.463
ADQ14197.1
KEGG: tex:Teth514_0250 hypothetical protein.
  
    0.461
ADQ14335.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
     
 0.452
ADQ13680.1
PFAM: Late competence development protein ComFB; KEGG: hor:Hore_19130 hypothetical protein.
  
     0.415
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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