Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ14345.1PFAM: alpha/beta hydrolase fold; KEGG: ckr:CKR_0469 hypothetical protein. (271 aa)    
Predicted Functional Partners:
ADQ13695.1
KEGG: ckl:CKL_2061 hypothetical protein.
   
 
 0.716
ADQ14662.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cts:Ctha_2428 NmrA family protein.
 
   0.660
ADQ15188.1
KEGG: hor:Hore_02970 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
   0.645
ADQ15281.1
NADH dehydrogenase (quinone); KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
   0.645
ADQ15189.1
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: hor:Hore_02960 NADH dehydrogenase I subunit E.
   
   0.622
ADQ15284.1
KEGG: tjr:TherJR_0740 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit.
   
   0.622
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.605
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
   0.538
ADQ15242.1
KEGG: hor:Hore_03080 hypothetical protein.
   
   0.537
ADQ14346.1
KEGG: amt:Amet_3789 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.520
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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