STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14358.1KEGG: pmo:Pmob_0854 glucuronate isomerase; PFAM: Glucuronate isomerase. (455 aa)    
Predicted Functional Partners:
ADQ14356.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: amt:Amet_0555 altronate oxidoreductase.
 
 
 0.980
ADQ14352.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mta:Moth_0429 mannitol dehydrogenase.
 
 
 0.977
ADQ14357.1
KEGG: oih:OB0366 hypothetical protein.
 
  
 0.970
ADQ14510.1
Beta-glucuronidase; KEGG: bhy:BHWA1_02243 beta-D-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.957
ADQ14359.1
KEGG: bha:BH0490 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein.
  
 0.953
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.952
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.946
ADQ14507.1
Transcriptional regulator, AraC family; PFAM: glycoside hydrolase family 39; helix-turn-helix- domain containing protein AraC type; KEGG: aoe:Clos_0056 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain.
  
  
  0.827
ADQ15770.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: str:Sterm_4046 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.567
ADQ13524.1
KEGG: clj:CLJU_c11630 2-keto-3-deoxy-6-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
     
 0.519
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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