Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14375.1KEGG: dps:DP2348 hypothetical protein. (152 aa)    
Predicted Functional Partners:
ADQ14374.1
PFAM: inositol monophosphatase; KEGG: gsu:GSU0942 inositol-1-monophosphatase.
       0.620
ADQ14376.1
PFAM: Methyltransferase type 11; KEGG: nth:Nther_2707 methyltransferase type 11.
       0.476
ADQ14373.1
PFAM: GCN5-related N-acetyltransferase; KEGG: cby:CLM_2446 acetyltransferase, GNAT family.
       0.422
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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