Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ14422.1PFAM: YKOF domain-containing protein; KEGG: mta:Moth_2201 hypothetical protein. (87 aa)    
Predicted Functional Partners:
ADQ14421.1
PFAM: protein of unknown function DUF187; KEGG: kol:Kole_1178 protein of unknown function DUF187.
       0.625
ADQ14420.1
PFAM: extracellular solute-binding protein family 1; KEGG: tle:Tlet_0109 extracellular solute-binding protein.
       0.462
ADQ14423.1
KEGG: mma:MM_1318 hypothetical protein; PFAM: CBS domain containing protein; peptidase M50; SMART: CBS domain containing protein; Belongs to the peptidase M50B family.
       0.405
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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