STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14496.1PFAM: cation transporter; KEGG: nth:Nther_0255 cation transporter. (494 aa)    
Predicted Functional Partners:
ADQ14495.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hor:Hore_11630 TrkA-C domain protein.
 
 
 0.968
ADQ14494.1
PFAM: TrkA-N domain protein; KEGG: tle:Tlet_0894 TrkA domain-containing protein.
 
 
 0.955
ADQ14187.1
PFAM: TrkA-N domain protein; KEGG: shc:Shell_1236 TrkA-N domain protein.
 
 
 0.867
ADQ14779.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: scl:sce7466 TrkA family potassium uptake protein.
 
 
 0.865
ADQ14493.1
KEGG: nth:Nther_0252 response regulator receiver protein; PFAM: response regulator receiver; Tetratricopeptide TPR_1 repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat.
 
     0.781
ADQ14491.1
KEGG: nth:Nther_0250 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein.
  
    0.739
ADQ14492.1
KEGG: nth:Nther_0251 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
     
 0.723
ADQ14685.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: hor:Hore_11690 TrkA-N domain protein.
  
 
 0.449
ADQ15738.1
KEGG: hor:Hore_20820 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein.
   
 
 0.445
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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