STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14593.1KEGG: amt:Amet_2929 hypothetical protein. (224 aa)    
Predicted Functional Partners:
ADQ14592.1
PFAM: Sporulation protein YtfJ; KEGG: cce:Ccel_0378 hypothetical protein.
  
    0.779
ADQ14594.1
TIGRFAM: threonine synthase; KEGG: tjr:TherJR_0934 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
       0.531
ADQ14595.1
KEGG: kko:Kkor_0171 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein.
       0.463
ADQ14596.1
PFAM: protein of unknown function DUF82; KEGG: cyh:Cyan8802_3080 protein of unknown function DUF82.
       0.463
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.