Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ14655.1 | ADQ14656.1 | Halsa_1225 | Halsa_1226 | KEGG: cnb:CNBG0440 hypothetical protein. | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted). | 0.554 |
ADQ14655.1 | clpB | Halsa_1225 | Halsa_1224 | KEGG: cnb:CNBG0440 hypothetical protein. | ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.445 |
ADQ14656.1 | ADQ14655.1 | Halsa_1226 | Halsa_1225 | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted). | KEGG: cnb:CNBG0440 hypothetical protein. | 0.554 |
ADQ14656.1 | clpB | Halsa_1226 | Halsa_1224 | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted). | ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.427 |
ADQ14656.1 | leuS | Halsa_1226 | Halsa_1703 | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted). | KEGG: hor:Hore_13370 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.402 |
clpB | ADQ14655.1 | Halsa_1224 | Halsa_1225 | ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | KEGG: cnb:CNBG0440 hypothetical protein. | 0.445 |
clpB | ADQ14656.1 | Halsa_1224 | Halsa_1226 | ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted). | 0.427 |
leuS | ADQ14656.1 | Halsa_1703 | Halsa_1226 | KEGG: hor:Hore_13370 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spo:SPAC1952.08c pyridoxamine 5'-phosphate oxidase (predicted). | 0.402 |