STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14660.1PFAM: Methyltransferase type 11; KEGG: cyt:cce_3443 hypothetical protein. (252 aa)    
Predicted Functional Partners:
ADQ14661.1
PFAM: Methyltransferase type 12; KEGG: cdl:CDR20291_3071 hypothetical protein.
 
  
 0.870
ADQ14662.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cts:Ctha_2428 NmrA family protein.
     
 0.464
ADQ14659.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: afl:Aflv_2662 transcription regulator containing filamentation induced by cAMP family (Fic) domain and ArsR subfamily HTH domain.
       0.456
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
   
 
 0.436
ADQ14663.1
PFAM: Abortive infection protein; KEGG: nth:Nther_1501 abortive infection protein.
 
     0.428
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.