STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14663.1PFAM: Abortive infection protein; KEGG: nth:Nther_1501 abortive infection protein. (232 aa)    
Predicted Functional Partners:
ADQ14662.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cts:Ctha_2428 NmrA family protein.
       0.565
ADQ14660.1
PFAM: Methyltransferase type 11; KEGG: cyt:cce_3443 hypothetical protein.
 
     0.428
ADQ14664.1
KEGG: cbi:CLJ_0035 transposase, family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
       0.421
ADQ13809.1
SagB-type dehydrogenase domain; KEGG: mem:Memar_2035 nitroreductase; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase.
 
    0.401
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.