STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14723.1PFAM: basic membrane lipoprotein; KEGG: nth:Nther_0420 basic membrane lipoprotein. (363 aa)    
Predicted Functional Partners:
ADQ14722.1
KEGG: nth:Nther_0421 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.992
ADQ14720.1
PFAM: inner-membrane translocator; KEGG: nth:Nther_0423 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.986
ADQ14721.1
PFAM: inner-membrane translocator; KEGG: nth:Nther_0422 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.986
ADQ15377.1
PFAM: basic membrane lipoprotein; KEGG: hor:Hore_00670 basic membrane lipoprotein.
  
  
 
0.923
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     0.528
ADQ14112.1
ABC transporter related protein; KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
     0.521
ADQ13659.1
KEGG: pin:Ping_2787 ABC transporter for sugar (aldose) ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
     0.517
ADQ14724.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: hor:Hore_08760 cell divisionFtsK/SpoIIIE.
       0.500
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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