STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ14784.1PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pwa:Pecwa_0558 TonB-dependent receptor. (594 aa)    
Predicted Functional Partners:
ADQ14783.1
TonB family protein; KEGG: mmu:100039272 predicted gene 2129; TIGRFAM: TonB family protein; PFAM: TonB domain.
 
 
 
 0.940
ADQ14782.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein.
 
   
 0.885
ADQ14781.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dap:Dacet_0828 biopolymer transport protein ExbD/TolR.
 
   
 0.802
ADQ14696.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hor:Hore_11800 biopolymer transport protein ExbD/TolR.
 
   
 0.687
ADQ14298.1
PFAM: outer membrane efflux protein; KEGG: hor:Hore_05030 outer membrane efflux protein.
  
   
 0.625
ADQ14020.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kol:Kole_0012 polysaccharide export protein.
  
     0.623
ADQ14695.1
TIGRFAM: TonB family protein; KEGG: hor:Hore_11790 TonB family protein.
   
 
 0.607
ADQ13889.1
PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: hor:Hore_17680 surface antigen (D15).
  
   
 0.588
ADQ13902.1
PFAM: permease YjgP/YjgQ family protein; KEGG: hor:Hore_17490 permease YjgP/YjgQ family protein.
  
     0.571
ADQ15787.1
KEGG: tjr:TherJR_3009 cobyrinic acid ac-diamide synthase.
    
 
 0.561
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.