STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ15417.1Membrane protein; KEGG: hor:Hore_21280 predicted membrane protein. (178 aa)    
Predicted Functional Partners:
ADQ15416.1
PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: hor:Hore_21270 AIR synthase related protein domain protein.
 
    0.871
ADQ15308.1
PFAM: cobalt transport protein; KEGG: hor:Hore_02440 cobalt transport protein.
 
 
 0.849
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
 0.754
ADQ15418.1
TIGRFAM: glutamine synthetase, type I; KEGG: hor:Hore_21290 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
       0.714
ADQ15419.1
Regulatory protein MerR; KEGG: hor:Hore_21300 putative transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
       0.714
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
 0.702
ADQ15415.1
PFAM: SpoVG family protein; KEGG: hor:Hore_21260 SpoVG family protein; Belongs to the SpoVG family.
       0.574
ADQ14213.1
Membrane protein; Manually curated; KEGG: hor:Hore_08330 predicted membrane protein.
  
   
 0.551
ispE
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.493
ADQ15773.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: hor:Hore_23330 predicted membrane protein.
  
     0.476
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.