STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ15423.1PFAM: PspC domain protein; KEGG: hor:Hore_21470 phage shock protein C, PspC. (141 aa)    
Predicted Functional Partners:
ADQ13683.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; KEGG: glo:Glov_1550 multi-sensor hybrid histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
   
 
 0.841
ADQ15422.1
KEGG: hor:Hore_21460 hypothetical protein.
       0.773
ADQ15746.1
PFAM: membrane protein of unknown function; KEGG: ana:alr2746 hypothetical protein.
  
    0.769
ADQ15424.1
KEGG: amt:Amet_4658 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
       0.701
ADQ15425.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
       0.446
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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