STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ15424.1KEGG: amt:Amet_4658 ABC transporter, transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (575 aa)    
Predicted Functional Partners:
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.717
ADQ15422.1
KEGG: hor:Hore_21460 hypothetical protein.
       0.701
ADQ15423.1
PFAM: PspC domain protein; KEGG: hor:Hore_21470 phage shock protein C, PspC.
       0.701
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.529
ADQ14082.1
KEGG: srm:SRM_01195 ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
  
0.512
ADQ14316.1
KEGG: mba:Mbar_A0600 gliding motility protein; PFAM: ABC transporter related; SMART: AAA ATPase.
0.476
ADQ15425.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
       0.465
ADQ15382.1
KEGG: hor:Hore_15620 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
   
  
0.421
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
   0.414
ADQ14257.1
KEGG: sat:SYN_01287 hydroxyacylglutathione hydrolase.
  
 
 0.408
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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