STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ15481.1FeS assembly protein SufB; KEGG: ckr:CKR_0745 hypothetical protein; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein. (467 aa)    
Predicted Functional Partners:
ADQ15479.1
KEGG: ckr:CKR_0747 hypothetical protein; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.997
ADQ15482.1
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: lba:Lebu_0492 FeS assembly ATPase SufC; SMART: AAA ATPase.
 
 0.997
ADQ15478.1
KEGG: cbe:Cbei_1852 NifU family SUF system FeS assembly protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein.
 
  
 0.978
ADQ14229.1
KEGG: mif:Metin_1116 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.965
ADQ15480.1
FeS assembly protein SufD; KEGG: ckr:CKR_0746 hypothetical protein; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.
 
  
0.944
ADQ15477.1
TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: fnu:FN0213 N-acylneuraminate-9-phosphatase.
       0.437
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.