Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ15531.1PFAM: OsmC family protein; KEGG: dtu:Dtur_1272 OsmC family protein. (137 aa)    
Predicted Functional Partners:
ADQ15532.1
PFAM: protein of unknown function DUF134; KEGG: hor:Hore_18270 predicted DNA-binding protein; Belongs to the UPF0251 family.
       0.705
ADQ15533.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: hor:Hore_21000 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.551
ADQ15530.1
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aco:Amico_0198 pyridoxal-5'-phosphate-dependent protein beta subunit.
       0.510
ADQ15534.1
KEGG: cpf:CPF_0803 hypothetical protein.
       0.484
ADQ15529.1
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
       0.450
ADQ15528.1
Cupin 2 conserved barrel domain protein; KEGG: mta:Moth_2004 MerR family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
    0.443
ADQ13842.1
KEGG: tte:TTE1014 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase.
  
     0.405
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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