Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ15537.1PFAM: major facilitator superfamily MFS_1; KEGG: nth:Nther_0686 major facilitator superfamily MFS_1. (391 aa)    
Predicted Functional Partners:
ADQ15538.1
KEGG: lba:Lebu_0008 hypothetical protein.
       0.671
ADQ14033.1
PFAM: major facilitator superfamily MFS_1; KEGG: nth:Nther_2806 major facilitator superfamily MFS_1.
 
  
 0.586
ADQ15688.1
PFAM: major facilitator superfamily MFS_1; KEGG: nth:Nther_2806 major facilitator superfamily MFS_1.
 
  
 0.550
ADQ15539.1
KEGG: nph:NP1336A hypothetical protein.
       0.507
ADQ14205.1
PFAM: outer membrane efflux protein; KEGG: npu:Npun_F6385 outer membrane efflux protein.
  
 
 0.473
ADQ13564.1
PFAM: DNA primase catalytic core domain; KEGG: hoh:Hoch_0630 DNA primase catalytic core domain protein.
  
     0.470
ADQ14307.1
TIGRFAM: PAS sensor protein; KEGG: mev:Metev_1156 PAS/PAC sensor signal transduction histidine kinase.
  
     0.459
ADQ15540.1
PFAM: O-antigen polymerase; KEGG: hor:Hore_18850 O-antigen polymerase.
       0.434
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.429
ADQ13981.1
KEGG: hmo:HM1_1037 glutamate synthase [nadph] large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.413
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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