Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ15582.1PFAM: alanine racemase domain protein; KEGG: hor:Hore_19150 alanine racemase domain protein. (357 aa)    
Predicted Functional Partners:
ADQ13909.1
KEGG: mmp:MMP0739 Asp/Glu racemase:aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family.
     
  0.900
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
     
  0.800
ADQ15581.1
PFAM: protein of unknown function DUF340 membrane; KEGG: hor:Hore_07210 predicted membrane protein.
 
     0.737
ADQ15580.1
KEGG: hor:Hore_19110 GAF domain-containing protein.
       0.543
ADQ15579.1
HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: tmt:Tmath_0918 haloacid dehalogenase domain protein hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.
       0.534
ADQ15773.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: hor:Hore_23330 predicted membrane protein.
  
     0.504
ADQ15583.1
PFAM: heat shock protein Hsp20; KEGG: hor:Hore_19240 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
       0.448
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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