Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ15641.1PFAM: periplasmic binding protein; KEGG: pmo:Pmob_1747 periplasmic binding protein. (346 aa)    
Predicted Functional Partners:
ADQ15640.1
PFAM: transport system permease protein; KEGG: pmo:Pmob_1748 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.985
ADQ15639.1
KEGG: pmo:Pmob_1749 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.984
ADQ15597.1
PFAM: transport system permease protein; KEGG: nth:Nther_2616 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.942
ADQ15622.1
PFAM: transport system permease protein; KEGG: hut:Huta_1822 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.942
ADQ15403.1
PFAM: transport system permease protein; KEGG: hor:Hore_00180 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.941
ADQ15596.1
KEGG: nth:Nther_2615 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.921
ADQ15402.1
KEGG: hor:Hore_00190 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.902
ADQ15621.1
KEGG: apo:Arcpr_1063 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.898
ADQ15555.1
PFAM: periplasmic binding protein; KEGG: hor:Hore_18990 periplasmic binding protein.
 
   
0.666
ADQ15489.1
KEGG: nth:Nther_2888 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase.
      
 0.643
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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