Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ13935.1 | ADQ15709.1 | Halsa_0462 | Halsa_2302 | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: btb:BMB171_C2085 thermitase. | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | 0.477 |
ADQ13935.1 | secY | Halsa_0462 | Halsa_1902 | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: btb:BMB171_C2085 thermitase. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.503 |
ADQ15708.1 | ADQ15709.1 | Halsa_2301 | Halsa_2302 | PFAM: metallophosphoesterase; 5'-Nucleotidase domain-containing protein; KEGG: nph:NP1854A 5'-nucleotidase 1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1; UDP-sugar hydrolase 1; Belongs to the 5'-nucleotidase family. | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | 0.558 |
ADQ15709.1 | ADQ13935.1 | Halsa_2302 | Halsa_0462 | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: btb:BMB171_C2085 thermitase. | 0.477 |
ADQ15709.1 | ADQ15708.1 | Halsa_2302 | Halsa_2301 | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | PFAM: metallophosphoesterase; 5'-Nucleotidase domain-containing protein; KEGG: nph:NP1854A 5'-nucleotidase 1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1; UDP-sugar hydrolase 1; Belongs to the 5'-nucleotidase family. | 0.558 |
ADQ15709.1 | ADQ15710.1 | Halsa_2302 | Halsa_2303 | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | KEGG: hor:Hore_03250 glycerone kinase; PFAM: Dak kinase. | 0.434 |
ADQ15709.1 | secY | Halsa_2302 | Halsa_1902 | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.477 |
ADQ15710.1 | ADQ15709.1 | Halsa_2303 | Halsa_2302 | KEGG: hor:Hore_03250 glycerone kinase; PFAM: Dak kinase. | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | 0.434 |
secY | ADQ13935.1 | Halsa_1902 | Halsa_0462 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: btb:BMB171_C2085 thermitase. | 0.503 |
secY | ADQ15709.1 | Halsa_1902 | Halsa_2302 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | TraB family protein; KEGG: dsy:DSY1534 hypothetical protein; TIGRFAM: TraB family protein; PFAM: TraB determinant protein. | 0.477 |