STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94256.1InterPro IPR002942; COGs: COG2302 conserved hypothetical protein contains S4-like domain; KEGG: RNA-binding S4 domain-containing protein; SPTR: A1HSA2 RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein. (258 aa)    
Predicted Functional Partners:
SMB94241.1
YggT family protein; InterPro IPR003425; KEGG: gur:Gura_1165 protein of unknown function YGGT; SPTR: A0NZ59 Putative uncharacterized protein; PFAM: protein of unknown function YGGT.
  
  
 0.932
sepF
Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
  
 0.927
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
 
     0.835
SMB94264.1
InterPro IPR007793:IPR019933; COGs: COG3599 Cell division initiation protein; KEGG: mxa:MXAN_3112 cell-division initiation protein DivIVA; SPTR: A1HSA3 DivIVA family protein; PFAM: DivIVA family protein; TIGRFAM: DivIVA domain.
  
    0.814
SMB94221.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.790
SMB94268.1
Hypothetical protein; InterPro IPR003746:IPR005228; COGs: COG1872 conserved hypothetical protein; KEGG: gme:Gmet_1164 hypothetical protein; SPTR: A5D180 UPF0235 protein PTH_1821; PFAM: protein of unknown function DUF167; Belongs to the UPF0235 family.
       0.789
prfB
Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
    
   0.755
SMB94217.1
Putative membrane fusion protein.
       0.742
mrnC
Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
   
 0.736
rpmG
LSU ribosomal protein L33P; InterPro IPR001705:IPR018264; SPTR: Q2RFN2 50S ribosomal protein L33; PFAM: ribosomal protein L33; TIGRFAM: ribosomal protein L33; KEGG: gsu:GSU2870 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.733
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.