STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94934.1Stage IV sporulation protein B; InterPro IPR008763:IPR014219; KEGG: she:Shewmr4_0043 C-terminal processing peptidase-3; SPTR: A1HQ54 Peptidase S55, SpoIVB; PFAM: peptidase S55 SpoIVB; PRIAM: SpoIVB peptidase; TIGRFAM: stage IV sporulation protein B. (435 aa)    
Predicted Functional Partners:
SMB94943.1
Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
   
 0.987
SMB90848.1
InterPro IPR010897; SPTR: A1HR03 Stage II sporulation P family protein; PFAM: Stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P.
  
   
 0.850
SMB95577.1
InterPro IPR007627:IPR000943; COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; KEGG: ppr:PBPRB0960 DNA-directed RNA polymerase sigma factor; SPTR: P62181 RNA polymerase sigma-28 factor; PFAM: sigma-70 region 2 domain protein.
  
  
 0.842
SMB94837.1
Stage III sporulation protein AG; KEGG: nam:NAMH_1064 mcp-signal transduction protein; SPTR: A5KR13 Putative uncharacterized protein.
 
     0.823
SMB94812.1
Stage III sporulation protein AD; InterPro IPR014211; SPTR: A1HQ75 Putative sporulation protein; PFAM: Sporulation stage III protein AD; TIGRFAM: stage III sporulation protein AD.
 
     0.818
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.815
SMB94816.1
Stage III sporulation protein AE; InterPro IPR014194; KEGG: Hypothetical protein CBG09235; SPTR: A1HQ74 Mutants block sporulation after engulfment; PFAM: Sporulation stage III protein AE; TIGRFAM: stage III sporulation protein AE.
 
     0.814
SMB94803.1
InterPro IPR009570; SPTR: A1HQ76 Stage III sporulation AC family protein; PFAM: Stage III sporulation AC family protein; TIGRFAM: stage III sporulation protein AC.
 
     0.813
SMB94792.1
Stage III sporulation protein AA; InterPro IPR003593:IPR014217; COGs: COG3854 conserved hypothetical protein; KEGG: ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase; SPTR: A1HQ78 AAA ATPase; SMART: AAA ATPase; TIGRFAM: stage III sporulation protein AA.
 
     0.812
SMB94464.1
InterPro IPR014201; SPTR: A1HTV1 Stage IV sporulation protein A; PFAM: Sporulation stage IV protein A; TIGRFAM: stage IV sporulation protein A.
  
   
 0.803
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.