STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB95350.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SMB95354.1
Protein of unknown function; KEGG: hiq:CGSHiGG_04785 hypothetical protein; SPTR: A4N138 Putative uncharacterized protein.
       0.584
SMB95358.1
Protein of unknown function; KEGG: ecr:ECIAI1_2636 conserved hypothetical protein from bacteriophage origin; SPTR: A8ATH2 Gp14.
       0.568
SMB95362.1
Hypothetical protein.
       0.568
SMB95364.1
Hypothetical protein.
       0.543
SMB95367.1
KEGG: plu:plu2894 hypothetical protein; SPTR: A8ATG9 Gp11.
       0.543
SMB95371.1
Hypothetical protein.
       0.543
SMB95373.1
Rho termination factor, N-terminal domain; KEGG: hypothetical protein; SPTR: Q4ZBB6 ORF045.
       0.543
SMB95342.1
Phage tail tape measure protein, TP901 family, core region; InterPro IPR010090; KEGG: wri:WRi_006940 tail tape measure protein; SPTR: Q4ZD65 ORF001; PFAM: tail tape measure protein TP901 core region; TIGRFAM: phage tail tape measure protein, TP901 family.
       0.478
SMB95390.1
KEGG: abc:ACICU_01040 prophage LambdaCh01,coat protein; SPTR: Q38582 Bacteriophage SPP1 complete nucleotide sequence.
       0.452
SMB95408.1
Phage minor structural protein GP20; InterPro IPR009636; KEGG: golgin B1, golgi integral membrane protein; SPTR: Q38580 Bacteriophage SPP1 complete nucleotide sequence; PFAM: minor structural GP20 protein.
       0.439
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.